• Annotator

    IJ plugin for multi-class annotation of color images

  • AMAPstudio

    AMAPstudio is a software suite for plants architecture modelling

    It contains several libraries:

    • Jeeb (Just Enough Elements for plants Biomodelling): a multi-purpose library by the AMAP developers
    • Sketch: a library for rough and flexible 3D rendering...
    • Simeo

      Scene Implantation Manager with Edition by Outline

      The tool is a multi purpose 3D scene editor to (i) create 3D scenes, (ii) export to rendering or other simulation tools, (iii) run scene level 3D evolution models....

    • Xplo

      A software for plant architecture eXploration

      Build, edit, visualize and filter plant architecture data. Handle simulation and modelisation modules. See the wiki Xplo for more details on the project....

  • DiagARCHI

    Application mobile pour du diagnostic architectural

    La méthode ARCHI est une méthode de diagnostic du dépérissement et des capacités de résilience des arbres basée sur des connaissances en architecture végétale. L’appli DiagARCHI est une aide au diagnostic, à la saisie des données in situ et aux statistiques au niveau d’une placette. L’observateur est guidé par un enchaînement de questions simples. Les questions concernent les symptômes de dégradation et les processus de restauration du houppier....


    BIOMASS, Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests.

  • Capsis

    Computer-Aided Projection of Strategies In Silviculture

    Capsis is a simulation platform for forestry growth / dynamics models. It is a tool for forest scientists, forest managers and education. It has been developed in the AMAP laboratory since 1999....

  • CMMP

    Continuous Mathematical Models for Plants

    • CROOT

      CRoot dedicated project, by Emilie Peynaud

    • PPE-PDE

      PPE-PDE project, by Emilie Peynaud


    A set of tools dedicated to tropical forest ecology based on remote sensing data

    • AMAPVox

      LiDAR data voxelisation software.

      Copyright (c) IRD (Institut de Recherche pour le Développement) 2016-2018

      Vincent, G., Antin, C., Laurans, M., Heurtebize, J., Durrieu, S., Lavalley, C., & Dauzat, J. (2017). Mapping plant area index of tropical evergreen forest by airborne laser scanning. A cross-validation study using LAI2200 optical sensor. Remote Sensing of Environment, 198, 254-266....

  • Pl@ntNet-Publish

    Botanical data Publication based on symphony

  • Pl@ntNet-Site vitrine

    Le projet du site vitrine, accessible à l'adresse
    et le site mobile

    svn checkout vitreplantnet
  • Mimetic Point Process

    R package to generate mimetic point processes.

  • Toaster

    Tree and planT Organs And STructures analysER (TOASTER) is the ImageJ's plugin which manages the different tools developped by the lab for the identification and geometrical characterization of anatomical structures from macro or microscopic images....

    • GT-RootS

      GT-RootS (Global Traits of Root System) is the automated Java-based solution we develop for processing the root system images coming from the Rhizoscope, a Cirad’s phenotyping plateform dedicated to adult cereal plants.

  • ASAP

    Aide à la Saisie de l'Architecture des Plantes
    Application Androïd

  • PlantBioM

    The goal of this project is to develop and provide a Scilab toolbox and a Java library devoted to the modelling and simulation of retroactions between plant growth and plant biomechanics

  • CMP

    Logiciel de comparaison (corrélations) d'images.

    • CMP, for Correlation Map and Profile, is a convenient tool aiming at comparing almost every kind of (quantitative as well as qualitative) surface patterns on the basis of raster image correlations.

    Web site : Soon available....

  • MHM


    MHM, for Multiscale Heterogeneity Map, is a convenient tool aiming at analysing almost every kind of surface patterns. It focuses on a multiscale analysis and offers multiscale maps and profiles of the mostly used pattern indices. This method is summarized within a coherent opensource software that makes analyses very friendly for ecological, remote sensing and even biological or physical studies. MHM is fully complementary to geostatistical tools (dedicated to point-pattern analyses) or to Fragstats modules (generally offering monoscale analyses) and focuses on patchy mosaics. MHM software has been developed from Gaucherel’s Matlab® routines (see references) and has been recently transformed into an open Java® multiplatform software (see developer forum). MHM works with images saved in raster mode and deliverates quantified indices in similar and different formats. ...

  • VoxeLidar

    Logiciel de voxelisation LIDAR développé par Julien Heurtebize
    Le projet est devenu AMAPVox

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